CRISPRs found in the submitted sequence(s)

Sequence: AJW4

Sequence description :
Length (bp): 2372492

Number of CRISPRs candidates = 7
Confirmed CRISPRs = 2	Questionable CRISPRs = 5
AJW4_Crispr_2 AJW4_Crispr_5	AJW4_PossibleCrispr_1 AJW4_PossibleCrispr_3 AJW4_PossibleCrispr_4 AJW4_PossibleCrispr_6 AJW4_PossibleCrispr_7
CRISPRs candidates localization

Confirmed CRISPRs (2)

CRISPR id : tmp_1_Crispr_2

CRISPR start position : 499228 ---------- CRISPR end position : 499501 ---------- CRISPR length : 273
DR consensus : GCTGTGCGTTGCAACAAAAATACTAAATCTGAAAGCTATTCCCAGT
DR length : 46 Number of spacers : 3

499228	GCTGTGCGTTGCAACAAAAATACTAAATCTGAAAGCTATTCCCAGT	CCCGACGGAAATCAACTTTCCGGAGCTGAA	499303
499304	GCTGTGCGTTGCAACAAAAATACTAAATCTGAAAGCTATTCCCAGT	AGGTGATTCATTTTCTTTGTTGTTCAGTCC	499379
499380	GCTGTGCGTTGCAACAAAAATACTAAATCTGAAAGCTATTCCCAGT	ACAGCGTGAAGTCGCCGGAGAGGCTGATTG	499455
499456	GCTGTGCGTTGCAACAACATTACTAAATCTGAAAGTTATTCCCAGT		499501

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_5

CRISPR start position : 1737627 ---------- CRISPR end position : 1738389 ---------- CRISPR length : 762
DR consensus : GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC
DR length : 36 Number of spacers : 11

1737627	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CGCTCAAAACGACTCAAGAAAAACAAATGAG	1737693
1737694	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	ACGGGAAGAAGAAAGGGCCATCAGGGAGAG	1737759
1737760	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TTTAGGCATAAGTAATAAGGAGGGCGTACC	1737825
1737826	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TTTACCAAAATTAATAAGACAATTAAAAGA	1737891
1737892	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	ATATTTCAAATAAGCACGATATAATGGAGC	1737957
1737958	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	ACCCCTTCCTCATTAATCATACCTTGTTCT	1738023
1738024	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	AAGGTGGAAAGTGTTGAAAACTACTATGGA	1738089
1738090	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	AGCCACGGGAATCGGAACCACATTGGGGAA	1738155
1738156	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TAAAAGATGATACTGAAACCCTCTCGATAG	1738221
1738222	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	AAATGTCTATTGTGTTCGCTCAAGTATTCA	1738287
1738288	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TATCTGCCTGAAAACGTCATGCCTTGAAAG	1738353
1738354	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC		1738389

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_1

CRISPR start position : 381131 ---------- CRISPR end position : 381263 ---------- CRISPR length : 132
DR consensus : GGGGTTATACTATAAAGGGTAGAGACTTTTAAGTATAAAGT
DR length : 41 Number of spacers : 1

381131	GAGGTAATACTATAAAGCCCTGAGGGGTTATACTATAAAGG	GTAGAGACTTTTAAGTATAAAGTATGGAGGCTTGATACTATAAAGTCATGG	381222
381223	GGGGTTATACTATAAAGGGTAGAGGCTTTTAAGTATAAAGT		381263

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_3

CRISPR start position : 519090 ---------- CRISPR end position : 519196 ---------- CRISPR length : 106
DR consensus : GCCATTGCTTTCATGGCAGCGATTTGAGCCGAGTCGGG
DR length : 38 Number of spacers : 1

519090	GCCATTGCTTTCATGGCAGCGATTTGAGCCGAGTCGGG	ACCCTTTCCTCCATTTGCTTTCATCTTTGCC	519158
519159	GCCATTGCTTTCATGGCAGCGATTTGAGCCGAGTCGGG		519196

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_4

CRISPR start position : 651262 ---------- CRISPR end position : 651358 ---------- CRISPR length : 96
DR consensus : CACCACGATGAGAAGAATAGAATTGTAAGCAA
DR length : 32 Number of spacers : 1

651262	CACCACGATGAGAAGAATAGAATTGTAAGCAA	TCCTCCACGATCTCGGTGTCTGATCTGCTTTTT	651326
651327	CACCACGATGAGAAGAATAGAATTGTAAGCAA		651358

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_6

CRISPR start position : 2038592 ---------- CRISPR end position : 2038699 ---------- CRISPR length : 107
DR consensus : GGAAGCCGTTGTCACGTGACAATCAC
DR length : 26 Number of spacers : 1

2038592	GGAAGCCGTTGTCACGTGACAATCAC	TCCGTGCATGATGCAGGAAGCCGTTGTCACGTGACAATCACTCCGTGCACGATGCA	2038673
2038674	GGAAGCCGTCGTCACGTGACAATCAC		2038699

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_7

CRISPR start position : 2043152 ---------- CRISPR end position : 2043249 ---------- CRISPR length : 97
DR consensus : GGCTGTGACCAAATTCATTTTTGGCACAGCCC
DR length : 32 Number of spacers : 1

2043152	GGCTGTGACCAAATTCATTTTTGGCACAGCCC	TCTTCCGAAACACGTGCCGCAAACGCTCCGATTC	2043217
2043218	GGCTGTGACCAAATTCATTTTTGGCACAGCCC		2043249

Display spacers	Crispr Properties