CRISPRs found in the submitted sequence(s)

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Sequence: PaDSM20707

Sequence description :
Length (bp): 2186370

Number of CRISPRs candidates = 11
Confirmed CRISPRs = 2	Questionable CRISPRs = 9
PaDSM20707_Crispr_5 PaDSM20707_Crispr_8	PaDSM20707_PossibleCrispr_1 PaDSM20707_PossibleCrispr_2 PaDSM20707_PossibleCrispr_3 PaDSM20707_PossibleCrispr_4 PaDSM20707_PossibleCrispr_6 PaDSM20707_PossibleCrispr_7 PaDSM20707_PossibleCrispr_9 PaDSM20707_PossibleCrispr_10 PaDSM20707_PossibleCrispr_11
CRISPRs candidates localization

Rebuild a CRISPR, modify the DR sequence

Confirmed CRISPRs (2)

CRISPR id : tmp_1_Crispr_5

• CRISPR start position : 1151851 ---------- CRISPR end position : 1153837 ---------- CRISPR length : 1986
• DR consensus : GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC
• DR length : 33 Number of spacers : 29

1151851	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	TGTTGGTGAGAGTTACGGTAAGTCAGTATCAGTTA	1151918
1151919	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ATTACTCAAAGAAAACTGAGAGGATAAAGCATCA	1151985
1151986	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ACTAATAGAAGATCTATAAGCTATGCCTAATCTAA	1152053
1152054	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ACTGGCTGGACTTTAGCAAGCAAGTTATCCACAT	1152120
1152121	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	CATCACGAAACTCATTAATGATTAACTTAACTAAT	1152188
1152189	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ATTCTGAGGTGCCTTATGATACTGCTAAGCCTATGG	1152257
1152258	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	GTTGGTCGTTGTATTGGGTTGTATATACTTGGTAT	1152325
1152326	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	TGCAGGTATACGGACTATCCAACAACAACCACA	1152391
1152392	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ACCCATAAATAAAAACTTAGGATCCTTAACCTGA	1152458
1152459	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	TCAGGCGTTGCGAGTGCCGTCTCTTGCTCCTCTT	1152525
1152526	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	GTGCCGAGGAAGTTTAGCAAGACAACCAGCGTGG	1152592
1152593	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	CCTCCTCGTCTATAACTATCGTAATTTGCACGATG	1152660
1152661	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	TTGTAGGTGCTTGTGTTGCCACCGCTTACGAAG	1152726
1152727	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	TCTATTTGTCTTGCTCATCACTGCTGGTTGTTTT	1152793
1152794	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	GCAAAAAAGTACCTCGCAAAGTGGTTGAAACAAGT	1152861
1152862	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	GAATGAAAGATTCTCAGAAATTCTTTGCGAAAACG	1152929
1152930	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	TTGAGGCTGTTGAGGTCTATTGTATATACCTCG	1152995
1152996	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ATCTTAAGAAGCTTGTGCCTGATATATGGCGTGAA	1153063
1153064	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ACAGGACCAAAAACAGCATCCCAATAAACAGAC	1153129
1153130	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ATGTAATTAACGTACTTTCCACCAACACGGAGTAA	1153197
1153198	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	CAAAACTAAGGCCGAAGAGCTTACGAAGATGCACA	1153265
1153266	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ATTATCAGGACGAGGCAAACCTGCACTTTCGAAAA	1153333
1153334	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	GGTTATGTGCCTCGCTACGATGAATATAGATAC	1153399
1153400	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	GGTCAACATCTGACACATTAAGCACATAAGAGTCA	1153467
1153468	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	AGACTTACGGTCTTGTATGTAGCGCGCATTCTCGT	1153535
1153536	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	ATTTAAACAAGTGTGGGGGGGGTACACGGCTGTGA	1153603
1153604	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	CAGATGGTACAGACGATTGTCGGTGCGATGCTG	1153669
1153670	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	AGTGGAAAGCTTTATATTTGCACTACAGCAACATA	1153737
1153738	GTCGCACCCCGCACGGGGTGCGTGAATTGAAAC	CCGTCTGAGAGGTCGGTGCGTCTTGTGGTCTCGC	1153804
1153805	GTCGCACCCCGCACGGGGTGCGTGAATTGACGA		1153837

Display spacers	Crispr Properties

[*]There are two kinds of "questionable" CRISPRs:

• Small CRISPRs, i.e structures having only two or three DRs
• Structures where the repeated motifs (DR in CRISPR) are not 100% identical.